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  5. Brara.D02553.1

Brara.D02553.1


Description : C2H2 subclass ZFP transcription factor


Gene families : OG_42_0000024 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02553.1
Cluster HCAA Clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
At5g57520 No alias Zinc finger protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39261] 0.02 Orthogroups_2024-Update
Brara.E00257.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Brara.G03704.1 No alias C2H2 subclass ZFP transcription factor 0.05 Orthogroups_2024-Update
Glyma.02G242600 No alias zinc finger protein 4 0.03 Orthogroups_2024-Update
Glyma.07G135900 No alias zinc-finger protein 10 0.03 Orthogroups_2024-Update
Glyma.11G214300 No alias zinc finger protein 4 0.02 Orthogroups_2024-Update
Glyma.20G117800 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G087980.1 No alias C2H2 subclass ZFP transcription factor 0.05 Orthogroups_2024-Update
LOC_Os02g57550 No alias ZOS2-18 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g08600 No alias ZOS4-05 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g14130 No alias ZOS5-05 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g42250 No alias ZOS12-10 - C2H2 zinc finger protein, expressed 0.03 Orthogroups_2024-Update
MA_357706g0010 No alias (at2g37740 : 102.0) zinc-finger protein 10 (ZFP10);... 0.03 Orthogroups_2024-Update
Potri.001G047500 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G298700 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Potri.017G134800 No alias zinc finger protein 7 0.03 Orthogroups_2024-Update
Pp1s173_9V6 No alias zinc finger protein 0.03 Orthogroups_2024-Update
Sobic.002G219300.1 No alias C2H2 subclass ZFP transcription factor 0.03 Orthogroups_2024-Update
Solyc06g068390 No alias LOW QUALITY:Zinc finger protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!