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  5. Brara.D02562.1

Brara.D02562.1


Description : Unknown function


Gene families : OG_42_0001513 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02562.1
Cluster HCAA Clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Brara.D00185.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.08G149600 No alias DNA-binding bromodomain-containing protein 0.02 Orthogroups_2024-Update
Glyma.13G244400 No alias bromodomain 4 0.03 Orthogroups_2024-Update
PSME_00046210-RA No alias (at1g61215 : 99.4) Bromodomain protein with a DNA... 0.04 Orthogroups_2024-Update
Seita.2G254700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 36 88
IPR001487 Bromodomain 278 357
No external refs found!