1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At2g13960

At2g13960


Description : At2g13960 [Source:UniProtKB/TrEMBL;Acc:Q29PZ8]


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g13960
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
A4A49_36591 No alias transcription factor myb44 0.02 Orthogroups_2024-Update
At2g23290 No alias At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179] 0.07 Orthogroups_2024-Update
At4g18770 No alias Transcription factor MYB98... 0.04 Orthogroups_2024-Update
At5g17800 No alias Transcription factor MYB56... 0.04 Orthogroups_2024-Update
Bradi3g36740 No alias myb domain protein 105 0.02 Orthogroups_2024-Update
Brara.G02889.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.02 Orthogroups_2024-Update
Glyma.03G073764 No alias myb domain protein 118 0.02 Orthogroups_2024-Update
LOC_Os02g09480 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os09g01960 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_89683g0010 No alias (at5g67300 : 191.0) Member of the R2R3 factor MYB gene... 0.04 Orthogroups_2024-Update
Potri.002G073500 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
Potri.007G017700 No alias myb domain protein 98 0.04 Orthogroups_2024-Update
Potri.009G096000 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Potri.010G195000 No alias myb domain protein 109 0.05 Orthogroups_2024-Update
Pp1s10_267V6 No alias r2r3-myb transcription factor 0.04 Orthogroups_2024-Update
Sobic.010G201388.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Solyc06g076840 No alias R2R3MYB transcription factor 119 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 75 121
No external refs found!