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  5. Brara.D02590.1

Brara.D02590.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02590.1
Cluster HCAA Clusters: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
A4A49_35584 No alias protein light-dependent short hypocotyls 10 0.02 Orthogroups_2024-Update
Glyma.03G164000 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Glyma.05G123400 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Glyma.08G116100 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Glyma.18G058600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Solyc04g009980 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Sopen02g021720 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 15 138
No external refs found!