1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D02763.1

Brara.D02763.1


Description : E3 ubiquitin ligase *(RIE1)


Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02763.1
Cluster HCAA Clusters: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
Bradi3g59936 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Orthogroups_2024-Update
Kfl00775_0030 kfl00775_0030_v1.1 (at4g11680 : 344.0) Zinc finger, C3HC4 type (RING... 0.02 Orthogroups_2024-Update
LOC_Os04g48050 No alias RING zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 310 352
No external refs found!