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  5. Brara.D02773.1

Brara.D02773.1


Description : E3 ubiquitin protein ligase *(PUB32) & EC_2.7 transferase transferring phosphorus-containing group


Gene families : OG_42_0000143 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02773.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
138945 No alias U-box domain-containing protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi1g51250 No alias U-box domain-containing protein kinase family protein 0.02 Orthogroups_2024-Update
Brara.G00162.1 No alias E3 ubiquitin protein ligase *(PUB34) & EC_2.7... 0.02 Orthogroups_2024-Update
Brara.J00720.1 No alias E3 ubiquitin protein ligase *(PUB51) & EC_2.7... 0.03 Orthogroups_2024-Update
PSME_00035313-RA No alias (at4g25160 : 588.0) U-box domain-containing protein... 0.03 Orthogroups_2024-Update
Potri.012G143100 No alias U-box domain-containing protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.4G029300.1 No alias E3 ubiquitin protein ligase *(PUB51) & E3 ubiquitin... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA 16Dec
MF GO:0004842 ubiquitin-protein transferase activity IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0006468 protein phosphorylation IEA 16Dec
BP GO:0016567 protein ubiquitination IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 487 726
IPR003613 Ubox_domain 759 829
No external refs found!