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  5. Brara.E00056.1

Brara.E00056.1


Description : Unknown function


Gene families : OG_42_0006480 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006480_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00056.1
Cluster HCAA Clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Kfl01135_0020 kfl01135_0020_v1.1 (at2g01410 : 142.0) NHL domain-containing protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005761 mitochondrial ribosome IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!