- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : EC_6.2 ligase forming carbon-sulfur bond
Gene families : OG_42_0000553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000553_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E00062.1 | |
| Cluster | HCAA Clusters: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.11G122500 | No alias | long-chain acyl-CoA synthetase 2 | 0.03 | Orthogroups_2024-Update | |
| Pp1s108_163V6 | No alias | acyl- synthetase-like protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s12_178V6 | No alias | amp-binding protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s408_23V6 | No alias | amp-binding protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Predicted GO |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Predicted GO |
| MF | GO:0004659 | prenyltransferase activity | IEP | Predicted GO |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Predicted GO |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0007155 | cell adhesion | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | Predicted GO |
| CC | GO:0009507 | chloroplast | IEP | Predicted GO |
| CC | GO:0009536 | plastid | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| BP | GO:0018342 | protein prenylation | IEP | Predicted GO |
| BP | GO:0022610 | biological adhesion | IEP | Predicted GO |
| CC | GO:0030117 | membrane coat | IEP | Predicted GO |
| CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
| CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
| CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| CC | GO:0044422 | organelle part | IEP | Predicted GO |
| CC | GO:0044425 | membrane part | IEP | Predicted GO |
| CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| MF | GO:0051287 | NAD binding | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
| BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0097354 | prenylation | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
| MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig | 71 | 522 |
| No external refs found! |