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  5. Brara.E00069.1

Brara.E00069.1


Description : MYB class-R2R3 subgroup-19/20 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00069.1
Cluster HCAA Clusters: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
At1g74650 No alias At1g74650 [Source:UniProtKB/TrEMBL;Acc:Q9CA52] 0.03 Orthogroups_2024-Update
Bradi2g37377 No alias myb domain protein 48 0.04 Orthogroups_2024-Update
Brara.B00568.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.04 Orthogroups_2024-Update
Brara.I00301.1 No alias MYB class-R2R3 subgroup-15 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G013581 No alias myb domain protein 48 0.03 Orthogroups_2024-Update
GRMZM2G041415 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.05G051700 No alias myb domain protein 85 0.03 Orthogroups_2024-Update
Glyma.06G188400 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G042100 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.17G232220 No alias myb domain protein 84 0.03 Orthogroups_2024-Update
HORVU4Hr1G084360.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.02 Orthogroups_2024-Update
LOC_Os03g20090 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os07g43580 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_22140g0010 No alias (at4g38620 : 249.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00010253-RA No alias (at1g48000 : 169.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00041506-RA No alias "(at2g47460 : 179.0) ""MYB12 belongs to subgroup 7 of... 0.02 Orthogroups_2024-Update
PSME_00052797-RA No alias (at3g13890 : 180.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
Potri.002G113700 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Pp1s6_416V6 No alias myb transcription factor 0.02 Orthogroups_2024-Update
Seita.4G086300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G039100.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G133700.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 74 117
IPR001005 SANT/Myb 21 68
No external refs found!