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  5. Brara.E00092.1

Brara.E00092.1


Description : clade C phosphatase


Gene families : OG_42_0001142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00092.1
Cluster HCAA Clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Solyc09g010780 No alias Protein phosphatase 2C family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 550 595
IPR001932 PPM-type_phosphatase_dom 661 799
No external refs found!