Brara.E00099.1

Description : cytosolic pyrophosphatase

Gene families : OG_42_0000742 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E00099.1
Cluster	HCAA Clusters: Cluster_135

Target	Alias	Description	ECC score	Gene Family Method
At3g53620	No alias	PPa4 [Source:UniProtKB/TrEMBL;Acc:A0A178VKC0]	0.03	Orthogroups_2024-Update
Bradi2g37340	No alias	pyrophosphorylase 4	0.03	Orthogroups_2024-Update
Bradi2g62470	No alias	pyrophosphorylase 4	0.03	Orthogroups_2024-Update
Glyma.01G172400	No alias	pyrophosphorylase 4	0.03	Orthogroups_2024-Update
HORVU1Hr1G005920.4	No alias	cytosolic pyrophosphatase	0.04	Orthogroups_2024-Update
HORVU3Hr1G116580.4	No alias	cytosolic pyrophosphatase	0.03	Orthogroups_2024-Update
LOC_Os02g47600	No alias	soluble inorganic pyrophosphatase, putative, expressed	0.02	Orthogroups_2024-Update
Potri.002G181300	No alias	pyrophosphorylase 1	0.03	Orthogroups_2024-Update
Potri.006G082500	No alias	pyrophosphorylase 4	0.03	Orthogroups_2024-Update
Sopen12g024320	No alias	Inorganic pyrophosphatase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004427	inorganic diphosphatase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	16Dec
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
MF	GO:0005199	structural constituent of cell wall	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0009664	plant-type cell wall organization	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR008162	Pyrophosphatase	55	206

External Links

No external refs found!