Brara.E00112.1

Description : HD-ZIP I/II-type transcription factor

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E00112.1
Cluster	HCAA Clusters: Cluster_376

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33564	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
At5g65310	No alias	Homeobox-leucine zipper protein ATHB-5...	0.04	Orthogroups_2024-Update
Brara.B00111.1	No alias	regulatory protein *(LMI1) of floral meristem identity...	0.03	Orthogroups_2024-Update
Brara.B01882.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D01330.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02811.1	No alias	HD-ZIP I/II-type transcription factor	0.05	Orthogroups_2024-Update
Brara.I00890.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J02798.1	No alias	regulatory protein *(LMI1) of floral meristem identity...	0.04	Orthogroups_2024-Update
HORVU2Hr1G092300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Kfl00088_0250	kfl00088_0250_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Kfl00862_0040	kfl00862_0040_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Kfl00914_0040	kfl00914_0040_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
LOC_Os09g21180	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os09g35910	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
MA_19453g0040	No alias	(at3g01470 : 183.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_60543g0010	No alias	(at5g15150 : 130.0) homeobox-containing gene with an...	0.03	Orthogroups_2024-Update
MA_799187g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00045510-RA	No alias	(at3g01470 : 122.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
Seita.1G253700.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077590	No alias	Homeobox-leucine zipper protein family (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc02g086930	No alias	Homeobox associated leucine zipper protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen03g032330	No alias	Homeobox domain	0.04	Orthogroups_2024-Update
Sopen06g018290	No alias	Homeobox domain	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	28	82
IPR003106	Leu_zip_homeo	84	125

External Links

No external refs found!

Brara.E00112.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation