Brara.E00136.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E00136.1
Cluster	HCAA Clusters: Cluster_306

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03410	No alias	putative wrky transcription factor 9	0.03	Orthogroups_2024-Update
A4A49_05021	No alias	putative wrky transcription factor 20	0.02	Orthogroups_2024-Update
At1g80590	No alias	Probable WRKY transcription factor 66...	0.03	Orthogroups_2024-Update
At5g15130	No alias	Probable WRKY transcription factor 72...	0.02	Orthogroups_2024-Update
Brara.A01631.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D02706.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G02862.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G015433	No alias	WRKY DNA-binding protein 56	0.02	Orthogroups_2024-Update
GRMZM2G018721	No alias	WRKY DNA-binding protein 57	0.02	Orthogroups_2024-Update
GRMZM2G125653	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
Glyma.03G042700	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Glyma.03G109100	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G061400	No alias	WRKY DNA-binding protein 40	0.05	Orthogroups_2024-Update
Glyma.05G123600	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Glyma.07G116300	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G280200	No alias	WRKY DNA-binding protein 33	0.04	Orthogroups_2024-Update
Glyma.19G221700	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G052010.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G013890.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os01g46800	No alias	WRKY15, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g16540	No alias	WRKY39, expressed	0.02	Orthogroups_2024-Update
PSME_00024308-RA	No alias	(at3g01970 : 113.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00037996-RA	No alias	(at5g43290 : 110.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
PSME_00039099-RA	No alias	(at3g01970 : 111.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.015G064100	No alias	WRKY DNA-binding protein 72	0.04	Orthogroups_2024-Update
Potri.016G137900	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
Potri.019G059300	No alias	WRKY DNA-binding protein 55	0.03	Orthogroups_2024-Update
Seita.5G255400.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G306000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G378000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sopen06g021620	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
MF	GO:0004129	cytochrome-c oxidase activity	IEP	Predicted GO
CC	GO:0005681	spliceosomal complex	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
MF	GO:0009916	alternative oxidase activity	IEP	Predicted GO
MF	GO:0015002	heme-copper terminal oxidase activity	IEP	Predicted GO
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	Predicted GO
MF	GO:0016676	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
BP	GO:0022900	electron transport chain	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	101	161

External Links

No external refs found!

Brara.E00136.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation