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  5. Brara.E00171.1

Brara.E00171.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00171.1
Cluster HCAA Clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_18507 No alias lob domain-containing protein 12 0.03 Orthogroups_2024-Update
A4A49_32358 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
At3g27650 No alias LOB domain-containing protein 25... 0.03 Orthogroups_2024-Update
Bradi3g35280 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G004400 No alias LOB domain-containing protein 25 0.04 Orthogroups_2024-Update
Glyma.13G349700 No alias LOB domain-containing protein 22 0.02 Orthogroups_2024-Update
Glyma.14G202300 No alias LOB domain-containing protein 13 0.03 Orthogroups_2024-Update
Glyma.17G086300 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Orthogroups_2024-Update
PSME_00050292-RA No alias (at2g40470 : 177.0) LOB domain-containing protein 15... 0.03 Orthogroups_2024-Update
Potri.010G217700 No alias LOB domain-containing protein 1 0.03 Orthogroups_2024-Update
Pp1s73_7V6 No alias lob domain-containing 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 20 117
No external refs found!