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  5. Brara.E00304.1

Brara.E00304.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00304.1
Cluster HCAA Clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
At5g28490 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1... 0.04 Orthogroups_2024-Update
Brara.A00975.1 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
Brara.B02341.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G00513.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00489.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Glyma.13G229700 No alias Protein of unknown function (DUF640) 0.06 Orthogroups_2024-Update
Glyma.13G290600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Glyma.19G248300 No alias Protein of unknown function (DUF640) 0.07 Orthogroups_2024-Update
LOC_Os05g28040 No alias DUF640 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00038756-RA No alias (at1g07090 : 219.0) LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6);... 0.04 Orthogroups_2024-Update
Seita.3G279900.1 No alias plant-specific ALOG-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.006G147500.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Solyc10g008000 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 15 138
No external refs found!