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  5. Brara.E00474.1

Brara.E00474.1


Description : chromatin remodeling factor *(ALC1)


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00474.1
Cluster HCAA Clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
MA_104034g0010 No alias (at5g66750 : 811.0) Protein is similar to SWI2/SNF2... 0.03 Orthogroups_2024-Update
Pp1s360_39V6 No alias syd atpase chromatin binding 0.02 Orthogroups_2024-Update
Solyc01g067390 No alias RNA helicase DEAH-box1 0.03 Orthogroups_2024-Update
Sopen01g031470 No alias SNF2 family N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 363 486
IPR000330 SNF2_N 57 342
No external refs found!