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  5. Brara.E00478.1

Brara.E00478.1


Description : M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00478.1
Cluster HCAA Clusters: Cluster_372

Target Alias Description ECC score Gene Family Method Actions
Bradi3g33217 No alias Matrixin family protein 0.03 Orthogroups_2024-Update
LOC_Os10g40830 No alias metalloendoproteinase 1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G157500 No alias Matrixin family protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA 16Dec
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008270 zinc ion binding IEA 16Dec
CC GO:0031012 extracellular matrix IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 131 292
IPR002477 Peptidoglycan-bd-like 47 92
No external refs found!