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  5. Brara.E00487.1

Brara.E00487.1


Description : Unknown function


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00487.1
Cluster HCAA Clusters: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
At1g53830 No alias Pectinesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42534] 0.02 Orthogroups_2024-Update
At2g43050 No alias Probable pectinesterase/pectinesterase inhibitor 16... 0.02 Orthogroups_2024-Update
At3g59010 No alias Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A178V613] 0.03 Orthogroups_2024-Update
At4g00190 No alias Putative pectinesterase/pectinesterase inhibitor 38... 0.05 Orthogroups_2024-Update
At4g33220 No alias Probable pectinesterase/pectinesterase inhibitor 44... 0.03 Orthogroups_2024-Update
At4g33230 No alias Putative pectinesterase/pectinesterase inhibitor 45... 0.03 Orthogroups_2024-Update
At5g51490 No alias Probable pectinesterase/pectinesterase inhibitor 59... 0.03 Orthogroups_2024-Update
Bradi1g17940 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Orthogroups_2024-Update
Brara.D02731.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.06G319000 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.06 Orthogroups_2024-Update
Glyma.13G115300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
LOC_Os03g18860 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434031g0010 No alias (o04886|pme1_citsi : 471.0) Pectinesterase-1 precursor... 0.03 Orthogroups_2024-Update
Mp8g00060.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00007922-RA No alias (at1g53830 : 539.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
Potri.002G202500 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.05 Orthogroups_2024-Update
Potri.015G013700 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Potri.T148300 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Pp1s149_288V6 No alias putative pectin esterase [Oryza sativa (japonica cultivar-group)] 0.02 Orthogroups_2024-Update
Pp1s378_15V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.03 Orthogroups_2024-Update
Sobic.004G321600.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.006G105500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc02g080210 No alias Pectinesterase (AHRD V3.3 *** K4B9P2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc02g080220 No alias Pectinesterase (AHRD V3.3 *** K4B9P3_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g034360 No alias Pectinesterase (AHRD V3.3 *** K4C4Q7_SOLLC) 0.02 Orthogroups_2024-Update
Sopen06g011070 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA 16Dec
MF GO:0030599 pectinesterase activity IEA 16Dec
BP GO:0042545 cell wall modification IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 28 170
IPR000070 Pectinesterase_cat 205 251
No external refs found!