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  5. Brara.E00504.1

Brara.E00504.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000426 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000426_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00504.1
Cluster HCAA Clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
At2g42430 No alias LOB domain-containing protein 16... 0.05 Orthogroups_2024-Update
At2g42440 No alias LOB domain-containing protein 17... 0.03 Orthogroups_2024-Update
At2g45420 No alias LBD18 [Source:UniProtKB/TrEMBL;Acc:A0A178VVX7] 0.07 Orthogroups_2024-Update
At3g58190 No alias LBD29 [Source:UniProtKB/TrEMBL;Acc:A0A178VM67] 0.04 Orthogroups_2024-Update
Brara.D02577.1 No alias AS2/LOB-type transcription factor 0.05 Orthogroups_2024-Update
Brara.D02578.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D02739.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G063160.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g05510 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00010378-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.002G149000 No alias LOB domain-containing protein 18 0.03 Orthogroups_2024-Update
Sobic.004G348800.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G165100.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g091400 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 36 134
No external refs found!