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Description : E3 ubiquitin protein ligase *(PUB32)
Gene families : OG_42_0007186 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007186_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E00535.1 | |
| Cluster | HCAA Clusters: Cluster_92 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| HORVU1Hr1G053230.7 | No alias | E3 ubiquitin protein ligase *(PUB32) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Predicted GO |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Predicted GO |
| BP | GO:0001510 | RNA methylation | IEP | Predicted GO |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Predicted GO |
| BP | GO:0009451 | RNA modification | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Predicted GO |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Predicted GO |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Predicted GO |
| CC | GO:0031011 | Ino80 complex | IEP | Predicted GO |
| BP | GO:0031167 | rRNA methylation | IEP | Predicted GO |
| BP | GO:0032259 | methylation | IEP | Predicted GO |
| CC | GO:0033202 | DNA helicase complex | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0043414 | macromolecule methylation | IEP | Predicted GO |
| CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
| CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Predicted GO |
| BP | GO:0070475 | rRNA base methylation | IEP | Predicted GO |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predicted GO |
| CC | GO:0097346 | INO80-type complex | IEP | Predicted GO |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predicted GO |
| CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |