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  5. Brara.E00594.1

Brara.E00594.1


Description : MYB class-R2R3 subgroup-22/23 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00594.1
Cluster HCAA Clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At2g23290 No alias At2g23280 [Source:UniProtKB/TrEMBL;Acc:O22179] 0.07 Orthogroups_2024-Update
At4g18770 No alias Transcription factor MYB98... 0.03 Orthogroups_2024-Update
Brara.H01296.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
Brara.K00691.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
Glyma.02G264900 No alias myb domain protein 73 0.04 Orthogroups_2024-Update
Glyma.04G080600 No alias Homeodomain-like protein 0.02 Orthogroups_2024-Update
Glyma.06G082300 No alias Homeodomain-like protein 0.04 Orthogroups_2024-Update
Glyma.07G228700 No alias myb domain protein 105 0.03 Orthogroups_2024-Update
Glyma.20G034100 No alias myb domain protein 105 0.03 Orthogroups_2024-Update
Seita.1G007400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen05g031360 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen08g022170 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
evm.model.contig_4428.5 No alias (at5g02320 : 218.0) Encodes a putative c-MYB-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 57 103
IPR001005 SANT/Myb 109 153
No external refs found!