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  5. Brara.E00636.1

Brara.E00636.1


Description : Unknown function


Gene families : OG_42_0000123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000123_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00636.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
A4A49_41150 No alias agglutinin 0.03 Orthogroups_2024-Update
At1g52100 No alias Mannose-binding lectin superfamily protein... 0.04 Orthogroups_2024-Update
At3g16450 No alias Jacalin-related lectin 33... 0.04 Orthogroups_2024-Update
At5g35940 No alias Jacalin-related lectin 41... 0.05 Orthogroups_2024-Update
Brara.E01595.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.14G194450 No alias Mannose-binding lectin superfamily protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G079360.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU3Hr1G075960.2 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os01g24960 No alias dirigent, putative 0.02 Orthogroups_2024-Update
LOC_Os01g51050 No alias jacalin-like lectin domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g07300 No alias jacalin-like lectin domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g09700 No alias Jacalin-like lectin domain containing protein, putative,... 0.03 Orthogroups_2024-Update
PSME_00002592-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Seita.3G185500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G337600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.9G225500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G372300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G313900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc10g078600 No alias Inorganic phosphate transporter 1-1 (AHRD V3.3 --* PHT11_ORYSJ) 0.03 Orthogroups_2024-Update
Sopen04g034000 No alias Jacalin-like lectin domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 212 340
IPR001229 Jacalin-like_lectin_dom 361 492
IPR001229 Jacalin-like_lectin_dom 52 188
No external refs found!