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  5. Brara.E00642.1

Brara.E00642.1


Description : UMF23-type solute transporter


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00642.1
Cluster HCAA Clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
Bradi5g08190 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Brara.J02036.1 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
HORVU2Hr1G069980.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
HORVU7Hr1G110840.1 No alias UMF23-type solute transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 12 257
IPR011701 MFS 338 540
No external refs found!