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  5. Brara.E00650.1

Brara.E00650.1


Description : histone demethylase *(PKDM7)


Gene families : OG_42_0001408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00650.1
Cluster HCAA Clusters: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
170257 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.05 Orthogroups_2024-Update
Glyma.09G083300 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.03 Orthogroups_2024-Update
Mp6g20340.1 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 Orthogroups_2024-Update
Potri.011G155100 No alias JUMONJI 14 0.03 Orthogroups_2024-Update
Potri.T118600 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.03 Orthogroups_2024-Update
Sopen02g018860 No alias JmjC domain, hydroxylase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0045048 protein insertion into ER membrane IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 330 442
IPR004198 Znf_C5HC2 549 599
IPR003349 JmjN 110 143
No external refs found!