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  5. Brara.E00669.1

Brara.E00669.1


Description : CTP


Gene families : OG_42_0002255 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00669.1
Cluster HCAA Clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Seita.7G305300.1 No alias CTP 0.03 Orthogroups_2024-Update
Sobic.005G017200.1 No alias CTP 0.03 Orthogroups_2024-Update
evm.model.tig00000241.77 No alias (at2g38670 : 392.0) Encodes a mitochondrial... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
BP GO:0009058 biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004821 Cyt_trans-like 257 351
IPR004821 Cyt_trans-like 57 185
No external refs found!