- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : alpha-class expansin
Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.E00745.1 | |
| Cluster | HCAA Clusters: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 409954 | No alias | expansin A8 | 0.02 | Orthogroups_2024-Update | |
| 419575 | No alias | expansin A16 | 0.02 | Orthogroups_2024-Update | |
| A4A49_01018 | No alias | expansin-a6 | 0.04 | Orthogroups_2024-Update | |
| A4A49_27627 | No alias | expansin-a4 | 0.03 | Orthogroups_2024-Update | |
| A4A49_38718 | No alias | expansin-a7 | 0.03 | Orthogroups_2024-Update | |
| At1g26770 | No alias | Expansin A10 [Source:UniProtKB/TrEMBL;Acc:F4HPC1] | 0.03 | Orthogroups_2024-Update | |
| At3g15370 | No alias | Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2] | 0.04 | Orthogroups_2024-Update | |
| At5g05290 | No alias | Expansin-A2 [Source:UniProtKB/Swiss-Prot;Acc:Q38866] | 0.03 | Orthogroups_2024-Update | |
| Bradi1g61190 | No alias | expansin A15 | 0.03 | Orthogroups_2024-Update | |
| Brara.D01734.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Brara.E00610.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G094523 | No alias | expansin A1 | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G339122 | No alias | expansin A1 | 0.04 | Orthogroups_2024-Update | |
| Kfl00857_0040 | kfl00857_0040_v1.1 | (at1g12560 : 155.0) Member of Alpha-Expansin Gene... | 0.01 | Orthogroups_2024-Update | |
| LOC_Os01g60770 | No alias | expansin precursor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os03g21820 | No alias | expansin precursor, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_10425823g0010 | No alias | (q852a1|expa7_orysa : 372.0) Expansin-A7 precursor... | 0.03 | Orthogroups_2024-Update | |
| MA_4979g0010 | No alias | (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... | 0.02 | Orthogroups_2024-Update | |
| MA_75790g0010 | No alias | (at5g05290 : 306.0) Encodes an expansin. Naming... | 0.03 | Orthogroups_2024-Update | |
| Mp2g18610.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
| PSME_00000399-RA | No alias | (q7xud0|exp10_orysa : 316.0) Expansin-A10 precursor... | 0.05 | Orthogroups_2024-Update | |
| PSME_00006372-RA | No alias | (at4g01630 : 153.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| PSME_00011355-RA | No alias | (at2g40610 : 387.0) member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| PSME_00014026-RA | No alias | (at1g69530 : 221.0) Member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| PSME_00029310-RA | No alias | (at1g26770 : 386.0) Encodes an expansin. Naming... | 0.03 | Orthogroups_2024-Update | |
| PSME_00050247-RA | No alias | (at2g40610 : 400.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| PSME_00051817-RA | No alias | (at1g20190 : 379.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
| PSME_00055878-RA | No alias | (at5g02260 : 159.0) member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
| Potri.004G080200 | No alias | expansin A13 | 0.03 | Orthogroups_2024-Update | |
| Potri.004G123200 | No alias | expansin A1 | 0.03 | Orthogroups_2024-Update | |
| Potri.005G244100 | No alias | expansin 11 | 0.04 | Orthogroups_2024-Update | |
| Potri.008G088300 | No alias | expansin A1 | 0.05 | Orthogroups_2024-Update | |
| Potri.013G154700 | No alias | expansin A8 | 0.03 | Orthogroups_2024-Update | |
| Potri.017G140000 | No alias | expansin A13 | 0.05 | Orthogroups_2024-Update | |
| Pp1s223_38V6 | No alias | alpha expansin xpa5 | 0.03 | Orthogroups_2024-Update | |
| Pp1s246_53V6 | No alias | alpha-expansin 1 | 0.03 | Orthogroups_2024-Update | |
| Pp1s266_66V6 | No alias | alpha expansin xpa5 | 0.02 | Orthogroups_2024-Update | |
| Pp1s325_11V6 | No alias | expa6 gene for putative alpha expansin protein family EXPA6 | 0.03 | Orthogroups_2024-Update | |
| Pp1s34_1V6 | No alias | alpha-expansin 8 | 0.02 | Orthogroups_2024-Update | |
| Pp1s48_7V6 | No alias | expansin 2 | 0.02 | Orthogroups_2024-Update | |
| Pp1s75_138V6 | No alias | alpha-expansin 8 | 0.03 | Orthogroups_2024-Update | |
| Seita.1G008200.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Seita.6G086300.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G338801.1 | No alias | alpha-class expansin | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G121900.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G173700.1 | No alias | alpha-class expansin | 0.03 | Orthogroups_2024-Update | |
| Solyc06g005560 | No alias | expansin9 | 0.03 | Orthogroups_2024-Update | |
| Solyc06g049050 | No alias | expansin 2 | 0.03 | Orthogroups_2024-Update | |
| Sopen05g003690 | No alias | Pollen allergen | 0.03 | Orthogroups_2024-Update | |
| Sopen06g032650 | No alias | Pollen allergen | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Predicted GO |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Predicted GO |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Predicted GO |
| MF | GO:0005253 | anion channel activity | IEP | Predicted GO |
| MF | GO:0005254 | chloride channel activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006536 | glutamate metabolic process | IEP | Predicted GO |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Predicted GO |
| BP | GO:0006821 | chloride transport | IEP | Predicted GO |
| MF | GO:0008113 | peptide-methionine (S)-S-oxide reductase activity | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Predicted GO |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015698 | inorganic anion transport | IEP | Predicted GO |
| MF | GO:0015930 | glutamate synthase activity | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Predicted GO |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Predicted GO |
| MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
| MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Predicted GO |
| No external refs found! |