1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E00749.1

Brara.E00749.1


Description : component *(eL36) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00749.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
267958 No alias Ribosomal protein L36e family protein 0.04 Orthogroups_2024-Update
439710 No alias Ribosomal protein L36e family protein 0.09 Orthogroups_2024-Update
At2g37600 No alias 60S ribosomal protein L36-1... 0.15 Orthogroups_2024-Update
Bradi2g23260 No alias Ribosomal protein L36e family protein 0.17 Orthogroups_2024-Update
Brara.G01608.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Cre12.g484050 No alias Ribosomal protein L36e family protein 0.24 Orthogroups_2024-Update
GRMZM2G009936 No alias Ribosomal protein L36e family protein 0.03 Orthogroups_2024-Update
GRMZM5G850966 No alias Ribosomal protein L36e family protein 0.07 Orthogroups_2024-Update
Glyma.10G233900 No alias Ribosomal protein L36e family protein 0.07 Orthogroups_2024-Update
Glyma.19G047300 No alias Ribosomal protein L36e family protein 0.1 Orthogroups_2024-Update
HORVU1Hr1G072270.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
HORVU3Hr1G086410.2 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU5Hr1G009610.2 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00110_0150 kfl00110_0150_v1.1 (at2g37600 : 143.0) Ribosomal protein L36e family... 0.07 Orthogroups_2024-Update
LOC_Os01g62350 No alias 60S ribosomal protein L36-2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g38520 No alias 60S ribosomal protein L36-2, putative, expressed 0.05 Orthogroups_2024-Update
MA_10430792g0010 No alias (at3g53740 : 140.0) Ribosomal protein L36e family... 0.06 Orthogroups_2024-Update
MA_24782g0010 No alias (at3g53740 : 142.0) Ribosomal protein L36e family... 0.03 Orthogroups_2024-Update
Mp1g05460.1 No alias component RPL36 of LSU proteome component 0.09 Orthogroups_2024-Update
PSME_00032528-RA No alias (at3g53740 : 137.0) Ribosomal protein L36e family... 0.13 Orthogroups_2024-Update
PSME_00032530-RA No alias (at3g53740 : 141.0) Ribosomal protein L36e family... 0.06 Orthogroups_2024-Update
PSME_00049847-RA No alias (at3g53740 : 141.0) Ribosomal protein L36e family... 0.07 Orthogroups_2024-Update
Potri.004G057000 No alias Ribosomal protein L36e family protein 0.03 Orthogroups_2024-Update
Potri.011G066000 No alias Ribosomal protein L36e family protein 0.03 Orthogroups_2024-Update
Potri.012G142600 No alias Ribosomal protein L36e family protein 0.11 Orthogroups_2024-Update
Pp1s249_65V6 No alias 60s ribosomal protein l36-2 0.21 Orthogroups_2024-Update
Pp1s34_151V6 No alias 60s ribosomal protein l36-2 0.13 Orthogroups_2024-Update
Pp1s84_102V6 No alias 60s ribosomal protein l36-2 0.18 Orthogroups_2024-Update
Seita.3G217000.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G351000.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.009G163800.1 No alias component *(eL36) of large ribosomal-subunit (LSU) proteome 0.23 Orthogroups_2024-Update
Solyc03g025520 No alias 60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC) 0.29 Orthogroups_2024-Update
Solyc06g036050 No alias 60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC) 0.19 Orthogroups_2024-Update
Sopen01g038370 No alias Ribosomal protein L36e 0.03 Orthogroups_2024-Update
Sopen03g004360 No alias Ribosomal protein L36e 0.28 Orthogroups_2024-Update
Sopen06g011800 No alias Ribosomal protein L36e 0.17 Orthogroups_2024-Update
evm.model.contig_3387.3 No alias (at2g37600 : 125.0) Ribosomal protein L36e family... 0.09 Orthogroups_2024-Update
evm.model.tig00021493.69 No alias (at2g37600 : 127.0) Ribosomal protein L36e family... 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003937 IMP cyclohydrolase activity IEP Predicted GO
MF GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
BP GO:0006164 purine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
BP GO:0072522 purine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 8 101
No external refs found!