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  5. Brara.E00894.1

Brara.E00894.1


Description : Unknown function


Gene families : OG_42_0005382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00894.1
Cluster HCAA Clusters: Cluster_104


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR004146 DC1 401 449
IPR004146 DC1 146 193
IPR004146 DC1 205 249
IPR004146 DC1 344 391
IPR004146 DC1 259 306
No external refs found!