1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E00979.1

Brara.E00979.1


Description : assembly factor (eIF1A) of eIF1


Gene families : OG_42_0002454 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002454_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E00979.1
Cluster HCAA Clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Potri.014G093801 No alias Nucleic acid-binding, OB-fold-like protein 0.03 Orthogroups_2024-Update
Seita.4G158600.1 No alias assembly factor (eIF1A) of eIF1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0003743 translation initiation factor activity IEA 16Dec
BP GO:0006413 translational initiation IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 32 96
No external refs found!