Brara.E01081.1

Description : mannan synthase *(CSLD)

Gene families : OG_42_0000743 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E01081.1
Cluster	HCAA Clusters: Cluster_405

Target	Alias	Description	ECC score	Gene Family Method
85326	No alias	cellulose synthase-like D3	0.02	Orthogroups_2024-Update
At2g33100	No alias	Cellulose synthase-like protein D1...	0.05	Orthogroups_2024-Update
Brara.F03926.1	No alias	mannan synthase *(CSLD)	0.03	Orthogroups_2024-Update
Glyma.02G286100	No alias	cellulose synthase like D4	0.03	Orthogroups_2024-Update
Glyma.12G017600	No alias	cellulose synthase-like D3	0.02	Orthogroups_2024-Update
Glyma.14G029200	No alias	cellulose synthase like D4	0.03	Orthogroups_2024-Update
Pp1s68_133V6	No alias	cellulose synthase-like glycosyltransferase family 2	0.02	Orthogroups_2024-Update
Sobic.010G146000.1	No alias	mannan synthase *(CSLD)	0.03	Orthogroups_2024-Update
Solyc01g067520	No alias	Cellulose synthase, putative (AHRD V3.3 *** B9RKY2_RICCO)	0.03	Orthogroups_2024-Update
Solyc05g053560	No alias	Cellulose synthase-like protein (AHRD V3.3 - A0A072V7S9_MEDTR)	0.04	Orthogroups_2024-Update
Sopen08g001300	No alias	Cellulose synthase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	16Dec
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	16Dec
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
BP	GO:0006606	protein import into nucleus	IEP	Predicted GO
BP	GO:0034504	protein localization to nucleus	IEP	Predicted GO
BP	GO:0051170	import into nucleus	IEP	Predicted GO
MF	GO:0061608	nuclear import signal receptor activity	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140142	nucleocytoplasmic carrier activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	266	1024

External Links

No external refs found!

Brara.E01081.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation