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  5. Brara.E01141.1

Brara.E01141.1


Description : HD-ZIP IV-type transcription factor


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01141.1
Cluster HCAA Clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Brara.E00526.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G265200 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
LOC_Os01g55549 No alias homeobox and START domains containing protein, putative,... 0.03 Orthogroups_2024-Update
LOC_Os08g08820 No alias homeobox and START domains containing protein, putative,... 0.02 Orthogroups_2024-Update
LOC_Os10g42490 No alias homeobox and START domains containing protein, putative,... 0.02 Orthogroups_2024-Update
Potri.015G034100 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Seita.9G309800.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g120620 No alias Homeobox leucine zipper protein (AHRD V3.3 *** G7IUR3_MEDTR) 0.03 Orthogroups_2024-Update
Solyc08g062520 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g006420 No alias Homeobox-leucine zipper family protein (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Sopen06g015560 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
MF GO:0008289 lipid binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 233 451
IPR001356 Homeobox_dom 61 116
No external refs found!