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  5. Brara.E01235.1

Brara.E01235.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01235.1
Cluster HCAA Clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At5g58500 No alias LSH5 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N9] 0.03 Orthogroups_2024-Update
Brara.C03056.1 No alias plant-specific ALOG-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.19G248300 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
HORVU1Hr1G041240.5 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
MA_139833g0010 No alias (at1g07090 : 137.0) LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6);... 0.02 Orthogroups_2024-Update
PSME_00040596-RA No alias (at2g31160 : 184.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3);... 0.02 Orthogroups_2024-Update
PSME_00056987-RA No alias (at3g23290 : 226.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4);... 0.03 Orthogroups_2024-Update
Potri.005G225600 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Potri.011G109900 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Potri.011G156600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Sobic.009G170100.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 39 162
No external refs found!