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  5. Brara.E01256.1

Brara.E01256.1


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01256.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Brara.H01905.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.06G284500 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Glyma.08G247300 No alias plastid transcription factor 1 0.02 Orthogroups_2024-Update
Glyma.18G268700 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
Glyma.18G280700 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
LOC_Os12g42190 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.011G096600 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Solyc03g119770 No alias branched1a 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 28 128
No external refs found!