Description : linker histone *(H1)
Gene families : OG_42_0000689 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.E01274.1 | |
Cluster | HCAA Clusters: Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_15807 | No alias | histone h1 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G121221 | No alias | winged-helix DNA-binding transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G106550.2 | No alias | linker histone *(H1) | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G106730.2 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update | |
Seita.7G207300.1 | No alias | linker histone *(H1) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | 16Dec |
MF | GO:0003677 | DNA binding | IEA | 16Dec |
BP | GO:0006334 | nucleosome assembly | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | Predicted GO |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009606 | tropism | IEP | Predicted GO |
BP | GO:0010274 | hydrotropism | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 54 | 119 |
No external refs found! |