1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E01292.1

Brara.E01292.1


Description : AS2/LOB-type transcription factor


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01292.1
Cluster HCAA Clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
At2g40470 No alias LOB domain-containing protein 15... 0.05 Orthogroups_2024-Update
Brara.F02209.1 No alias AS2/LOB-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I00295.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I00725.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.15G045200 No alias LOB domain-containing protein 11 0.04 Orthogroups_2024-Update
Glyma.19G004900 No alias LOB domain-containing protein 25 0.03 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.02 Orthogroups_2024-Update
PSME_00056008-RA No alias (at2g30130 : 185.0) Overexpression/activation tagged... 0.03 Orthogroups_2024-Update
Potri.013G081200 No alias LOB domain-containing protein 15 0.03 Orthogroups_2024-Update
Sobic.003G383700.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g109240 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g050950 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004883 LOB 52 148
No external refs found!