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  5. Brara.E01324.1

Brara.E01324.1


Description : villin actin-crosslinking factor


Gene families : OG_42_0000618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01324.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
PSME_00015000-RA No alias (at2g41740 : 705.0) Encodes a protein with high homology... 0.03 Orthogroups_2024-Update
PSME_00031262-RA No alias (at2g41740 : 202.0) Encodes a protein with high homology... 0.03 Orthogroups_2024-Update
Seita.7G227100.1 No alias villin actin-crosslinking factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA 16Dec
BP GO:0007010 cytoskeleton organization IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 862 897
IPR007123 Gelsolin-like_dom 635 707
IPR007123 Gelsolin-like_dom 269 339
IPR007123 Gelsolin-like_dom 148 216
IPR007123 Gelsolin-like_dom 31 111
IPR007123 Gelsolin-like_dom 408 479
No external refs found!