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  5. Brara.E01473.1

Brara.E01473.1


Description : cation exchanger *(NCL/EF-CAX)


Gene families : OG_42_0001514 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01473.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G028540.1 No alias cation exchanger *(NCL/EF-CAX) 0.03 Orthogroups_2024-Update
Mp1g03300.1 No alias cation exchanger (NCL/EF-CAX) 0.03 Orthogroups_2024-Update
Pp1s52_184V6 No alias calcium ion binding 0.03 Orthogroups_2024-Update
Pp1s6_337V6 No alias calcium ion binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 302 365
IPR004837 NaCa_Exmemb 83 259
IPR004837 NaCa_Exmemb 433 575
No external refs found!