Brara.E01518.1

Description : component *(NF-YA) of NF-Y transcription factor complex

Gene families : OG_42_0000352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E01518.1
Cluster	HCAA Clusters: Cluster_194

Target	Alias	Description	ECC score	Gene Family Method
At3g14020	No alias	Nuclear transcription factor Y subunit A-6...	0.03	Orthogroups_2024-Update
GRMZM2G038303	No alias	nuclear factor Y, subunit A3	0.03	Orthogroups_2024-Update
Glyma.03G203000	No alias	nuclear factor Y, subunit A10	0.03	Orthogroups_2024-Update
Glyma.13G107900	No alias	nuclear factor Y, subunit A3	0.03	Orthogroups_2024-Update
LOC_Os02g53620	No alias	nuclear transcription factor Y subunit, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g48970	No alias	nuclear transcription factor Y subunit, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g41720	No alias	nuclear transcription factor Y subunit, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os10g25850	No alias	nuclear transcription factor Y subunit, putative, expressed	0.02	Orthogroups_2024-Update
Sopen01g004020	No alias	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	0.02	Orthogroups_2024-Update
Sopen02g019020	No alias	CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006835	dicarboxylic acid transport	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015740	C4-dicarboxylate transport	IEP	Predicted GO
BP	GO:0015743	malate transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
BP	GO:0040008	regulation of growth	IEP	Predicted GO
BP	GO:0045927	positive regulation of growth	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	IEP	Predicted GO
MF	GO:0061657	UFM1 conjugating enzyme activity	IEP	Predicted GO
MF	GO:0071568	UFM1 transferase activity	IEP	Predicted GO
BP	GO:0071569	protein ufmylation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001289	NFYA	124	179

External Links

No external refs found!

Brara.E01518.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation