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  5. Brara.E01559.1

Brara.E01559.1


Description : Unknown function


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01559.1
Cluster HCAA Clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
115497 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
85812 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
A4A49_27021 No alias putative indole-3-acetic acid-amido synthetase gh3.1 0.03 Orthogroups_2024-Update
A4A49_40489 No alias putative indole-3-acetic acid-amido synthetase gh3.9 0.03 Orthogroups_2024-Update
At5g13320 No alias Auxin-responsive GH3 family protein [Source:TAIR;Acc:AT5G13320] 0.05 Orthogroups_2024-Update
At5g13380 No alias Auxin-responsive GH3 family protein... 0.06 Orthogroups_2024-Update
Brara.A01696.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B01373.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Brara.F00407.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I00224.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.02 Orthogroups_2024-Update
Brara.I05218.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G053338 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.01G190600 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Glyma.02G154600 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Glyma.16G026900 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
Glyma.U031110 No alias Auxin-responsive GH3 family protein 0.06 Orthogroups_2024-Update
MA_66253g0010 No alias (at5g54510 : 182.0) Encodes an IAA-amido synthase that... 0.04 Orthogroups_2024-Update
PSME_00030829-RA No alias (at5g54510 : 861.0) Encodes an IAA-amido synthase that... 0.05 Orthogroups_2024-Update
PSME_00043353-RA No alias (at5g54510 : 867.0) Encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Seita.2G375300.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Seita.2G426000.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Seita.5G329500.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Solyc01g107390 No alias GH3 (AHRD V3.3 *** E2FHL1_9ROSI) 0.03 Orthogroups_2024-Update
Sopen07g026580 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 10 549
No external refs found!