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  5. Brara.E01561.1

Brara.E01561.1


Description : Unknown function


Gene families : OG_42_0000201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type
  • Description
    		•  Actions
    Neighborhood Brassica rapa: Brara.E01561.1
    Cluster HCAA Clusters: Cluster_329

    Target Alias Description ECC score Gene Family Method Actions
    416768 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
    At3g55190 No alias Alpha/beta-Hydrolases superfamily protein... 0.03 Orthogroups_2024-Update
    At3g62860 No alias Alpha/beta-Hydrolases superfamily protein... 0.04 Orthogroups_2024-Update
    Bradi2g54367 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
    Brara.D02387.1 No alias monoacylglycerol lipase 0.03 Orthogroups_2024-Update
    Cre12.g504350 No alias alpha/beta-Hydrolases superfamily protein 0.02 Orthogroups_2024-Update
    Glyma.02G017900 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
    Potri.011G046500 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
    Potri.014G129000 No alias alpha/beta-Hydrolases superfamily protein 0.03 Orthogroups_2024-Update
    Sobic.003G149400.1 No alias monoacylglycerol lipase 0.02 Orthogroups_2024-Update

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
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    Type GO Term Name Evidence Source
    BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
    MF GO:0003677 DNA binding IEP Predicted GO
    MF GO:0003972 RNA ligase (ATP) activity IEP Predicted GO
    CC GO:0005739 mitochondrion IEP Predicted GO
    BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
    BP GO:0008033 tRNA processing IEP Predicted GO
    BP GO:0008380 RNA splicing IEP Predicted GO
    MF GO:0008452 RNA ligase activity IEP Predicted GO
    MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
    MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
    MF GO:0030151 molybdenum ion binding IEP Predicted GO
    MF GO:0046983 protein dimerization activity IEP Predicted GO
    InterPro domains Description Start Stop
    IPR022742 Hydrolase_4 168 214
    No external refs found!