Brara.E01589.1

Description : component *(eL37) of large ribosomal-subunit (LSU) proteome

Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E01589.1
Cluster	HCAA Clusters: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
At1g15250	No alias	60S ribosomal protein L37-1...	0.06	Orthogroups_2024-Update
At1g52300	No alias	60S ribosomal protein L37-2...	0.04	Orthogroups_2024-Update
At3g16080	No alias	60S ribosomal protein L37-3...	0.05	Orthogroups_2024-Update
Bradi3g01190	No alias	Zinc-binding ribosomal protein family protein	0.09	Orthogroups_2024-Update
Bradi3g55170	No alias	Zinc-binding ribosomal protein family protein	0.1	Orthogroups_2024-Update
Brara.E02541.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Brara.F00200.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.13	Orthogroups_2024-Update
Brara.H00172.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre10.g430400	No alias	Zinc-binding ribosomal protein family protein	0.07	Orthogroups_2024-Update
GRMZM2G168674	No alias	Zinc-binding ribosomal protein family protein	0.08	Orthogroups_2024-Update
Glyma.08G205500	No alias	Zinc-binding ribosomal protein family protein	0.06	Orthogroups_2024-Update
Glyma.13G357900	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
Glyma.15G015500	No alias	Zinc-binding ribosomal protein family protein	0.05	Orthogroups_2024-Update
HORVU6Hr1G005390.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
HORVU6Hr1G090070.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Kfl00864_0030	kfl00864_0030_v1.1	(at3g16080 : 136.0) Zinc-binding ribosomal protein...	0.04	Orthogroups_2024-Update
MA_129829g0010	No alias	(at3g16080 : 128.0) Zinc-binding ribosomal protein...	0.04	Orthogroups_2024-Update
Mp2g12400.1	No alias	component RPL37 of LSU proteome component	0.07	Orthogroups_2024-Update
PSME_00050791-RA	No alias	(at3g16080 : 155.0) Zinc-binding ribosomal protein...	0.13	Orthogroups_2024-Update
Potri.006G243300	No alias	Zinc-binding ribosomal protein family protein	0.1	Orthogroups_2024-Update
Potri.018G036900	No alias	Zinc-binding ribosomal protein family protein	0.09	Orthogroups_2024-Update
Pp1s152_133V6	No alias	60s ribosomal protein l37	0.12	Orthogroups_2024-Update
Pp1s222_87V6	No alias	60s ribosomal protein l37	0.12	Orthogroups_2024-Update
Pp1s24_197V6	No alias	60s ribosomal protein l37	0.02	Orthogroups_2024-Update
Pp1s3_512V6	No alias	60s ribosomal protein l37	0.12	Orthogroups_2024-Update
Pp1s475_18V6	No alias	60s ribosomal protein l37	0.15	Orthogroups_2024-Update
Pp1s83_87V6	No alias	60s ribosomal protein l37	0.02	Orthogroups_2024-Update
Seita.1G119400.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Seita.1G363500.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Sobic.001G347901.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.21	Orthogroups_2024-Update
Sobic.004G008400.1	No alias	component *(eL37) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Solyc03g120780	No alias	Ribosomal protein L37 (AHRD V3.3 *** K4BMM7_SOLLC)	0.1	Orthogroups_2024-Update
Solyc06g066660	No alias	Ribosomal protein L37 (AHRD V3.3 *** M1BDD8_SOLTU)	0.14	Orthogroups_2024-Update
Solyc08g068180	No alias	Ribosomal protein L37 (AHRD V3.3 *** K4CM42_SOLLC)	0.1	Orthogroups_2024-Update
Sopen03g039600	No alias	Ribosomal protein L37e	0.15	Orthogroups_2024-Update
Sopen06g024930	No alias	Ribosomal protein L37e	0.19	Orthogroups_2024-Update
evm.model.tig00020610.80	No alias	(at1g52300 : 115.0) Zinc-binding ribosomal protein...	0.14	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predicted GO
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
MF	GO:0003909	DNA ligase activity	IEP	Predicted GO
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Predicted GO
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Predicted GO
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Predicted GO
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
CC	GO:0005680	anaphase-promoting complex	IEP	Predicted GO
CC	GO:0005741	mitochondrial outer membrane	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006310	DNA recombination	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predicted GO
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predicted GO
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Predicted GO
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Predicted GO
MF	GO:0019238	cyclohydrolase activity	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predicted GO
CC	GO:0031968	organelle outer membrane	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
BP	GO:0046483	heterocycle metabolic process	IEP	Predicted GO
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001569	Ribosomal_L37e	2	53

External Links

No external refs found!

Brara.E01589.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation