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  5. Brara.E01616.1

Brara.E01616.1


Description : Unknown function


Gene families : OG_42_0000413 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01616.1
Cluster HCAA Clusters: Cluster_365

Target Alias Description ECC score Gene Family Method Actions
At4g15060 No alias CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596),... 0.03 Orthogroups_2024-Update
At4g26340 No alias F-box/FBD/LRR-repeat protein At4g26340... 0.03 Orthogroups_2024-Update
At5g38580 No alias FBD-like domain family protein... 0.03 Orthogroups_2024-Update
Brara.B01276.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01530.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00792.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03798.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01074.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G325500 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 151 176
IPR006566 FBD 338 383
IPR001810 F-box_dom 4 38
No external refs found!