Brara.E01618.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.E01618.1
Cluster	HCAA Clusters: Cluster_53

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10722	No alias	dof zinc finger protein dof2.4	0.04	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
Bradi2g62380	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Brara.D02286.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Brara.I00711.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I01305.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G327189	No alias	Dof-type zinc finger DNA-binding family protein	0.05	Orthogroups_2024-Update
Glyma.15G022800	No alias	DOF zinc finger protein 1	0.03	Orthogroups_2024-Update
Potri.007G036400	No alias	OBF binding protein 1	0.03	Orthogroups_2024-Update
Potri.012G018700	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Pp1s26_282V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.03	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.03	Orthogroups_2024-Update
Sopen03g032010	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g022000	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Predicted GO
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0016836	hydro-lyase activity	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	33	89

External Links

No external refs found!