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  5. Brara.E01651.1

Brara.E01651.1


Description : Golgi-ER retrograde trafficking cargo receptor *(PDI-C)


Gene families : OG_42_0004313 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01651.1
Cluster HCAA Clusters: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
evm.model.contig_4476.24 No alias (at1g50950 : 107.0) INVOLVED IN: cell redox homeostasis;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 145 243
IPR012936 Erv_C 285 464
IPR039542 Erv_N 7 97
No external refs found!