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  5. Brara.E01683.1

Brara.E01683.1


Description : Unknown function


Gene families : OG_42_0000750 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000750_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01683.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
At1g58270 No alias At1g58270/F19C14_8 [Source:UniProtKB/TrEMBL;Acc:Q9SLV3] 0.03 Orthogroups_2024-Update
Brara.C01688.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C02564.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01412.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I00078.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.19G203800 No alias ubiquitin-specific protease 12 0.03 Orthogroups_2024-Update
Potri.003G103200 No alias TRAF-like family protein 0.04 Orthogroups_2024-Update
Potri.014G055400 No alias TRAF-like family protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 95 208
IPR002083 MATH/TRAF_dom 236 353
No external refs found!