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  5. Brara.E01775.1

Brara.E01775.1


Description : regulatory protein *(LSD/LOL) of programmed cell death


Gene families : OG_42_0001639 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01775.1
Cluster HCAA Clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G060057 No alias LSD1 zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.U031408 No alias LSD1 zinc finger family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G073170.3 No alias regulatory protein *(LSD/LOL) of programmed cell death 0.03 Orthogroups_2024-Update
LOC_Os07g28910 No alias LSD1 zinc finger domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g06280 No alias LSD1 zinc finger domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00027028-RA No alias (at1g10760 : 135.0) Encodes an α-glucan, water... 0.02 Orthogroups_2024-Update
PSME_00045872-RA No alias (at1g32540 : 145.0) Encodes a protein with 3... 0.01 Orthogroups_2024-Update
Seita.6G075700.1 No alias regulatory protein *(LSD/LOL) of programmed cell death 0.03 Orthogroups_2024-Update
Seita.9G159900.1 No alias regulatory protein *(LSD/LOL) of programmed cell death 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 38 62
IPR005735 Znf_LSD1 115 139
IPR005735 Znf_LSD1 77 101
No external refs found!