1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.E01824.1

Brara.E01824.1


Description : Unknown function


Gene families : OG_42_0000855 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000855_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01824.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_17207 No alias annexin d1 0.04 Orthogroups_2024-Update
A4A49_26207 No alias annexin d3 0.04 Orthogroups_2024-Update
A4A49_38512 No alias annexin d2 0.02 Orthogroups_2024-Update
A4A49_63295 No alias annexin d3 0.03 Orthogroups_2024-Update
At2g38760 No alias Annexin [Source:UniProtKB/TrEMBL;Acc:A0A178W040] 0.02 Orthogroups_2024-Update
At5g65020 No alias Annexin D2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEE2] 0.03 Orthogroups_2024-Update
PSME_00014493-RA No alias (at1g35720 : 354.0) Encodes a member of the annexin gene... 0.05 Orthogroups_2024-Update
Seita.3G260500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G404100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen04g029200 No alias Annexin 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
MF GO:0005544 calcium-dependent phospholipid binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018502 Annexin_repeat 246 311
IPR018502 Annexin_repeat 170 222
IPR018502 Annexin_repeat 88 152
IPR018502 Annexin_repeat 16 79
No external refs found!