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  5. At2g16740

At2g16740


Description : UBC29 [Source:UniProtKB/TrEMBL;Acc:A0A178VQZ9]


Gene families : OG_42_0000236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g16740
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Brara.A03550.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Brara.B01288.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Brara.J01050.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Glyma.12G032800 No alias ubiquitin-conjugating enzyme 10 0.03 Orthogroups_2024-Update
Glyma.19G253000 No alias ubiquitin-conjugating enzyme 28 0.03 Orthogroups_2024-Update
Mp3g18170.1 No alias conjugation E2 protein 0.02 Orthogroups_2024-Update
Pp1s69_31V6 No alias ubiquitin conjugating enzyme 0.03 Orthogroups_2024-Update
Seita.3G077800.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Sopen03g003420 No alias Ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Sopen10g005530 No alias Ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
evm.model.tig00020562.32 No alias (at3g08690 : 270.0) ubiquitin-conjugating enzyme 11... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!