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  5. Brara.E01886.1

Brara.E01886.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01886.1
Cluster HCAA Clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
8844 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
A4A49_01388 No alias ring-h2 finger protein atl11 0.05 Orthogroups_2024-Update
A4A49_10724 No alias ring-h2 finger protein atl33 0.02 Orthogroups_2024-Update
A4A49_18116 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
Bradi1g15627 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g22650 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g46040 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00708.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.04 Orthogroups_2024-Update
Brara.A03044.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.B02994.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C01806.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G01336.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G460958 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G239900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G015200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G078800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G242500 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G014600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G227700 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G053130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G096480.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G080020.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os02g08200 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g35329 No alias RING-H2 finger protein ATL3F, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g46100 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431388g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_1143g0010 No alias (at1g49230 : 105.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_227897g0010 No alias (at3g16720 : 112.0) RING-H2 protein induced after... 0.04 Orthogroups_2024-Update
MA_38494g0010 No alias (at1g49230 : 119.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
MA_43543g0010 No alias (at3g16720 : 107.0) RING-H2 protein induced after... 0.04 Orthogroups_2024-Update
MA_569551g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_634100g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.03 Orthogroups_2024-Update
Mp6g19130.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G144200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G219200 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.011G063100 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.012G003900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G025800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G073500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G043200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Seita.1G203900.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.2G238400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.002G189800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G109300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G301300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g088440 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc01g105610 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc01g105620 No alias RING/U-box superfamily protein, putative (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Sopen03g034470 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen05g033830 No alias Ring finger domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 99 141
No external refs found!