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  5. Brara.E01922.1

Brara.E01922.1


Description : subfamily ABCC transporter


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.E01922.1
Cluster HCAA Clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
A4A49_05255 No alias abc transporter c family member 2 0.06 Orthogroups_2024-Update
A4A49_29091 No alias abc transporter c family member 4 0.02 Orthogroups_2024-Update
At3g62700 No alias ABC transporter C family member 14... 0.03 Orthogroups_2024-Update
Bradi2g04577 No alias multidrug resistance-associated protein 3 0.04 Orthogroups_2024-Update
Brara.K00933.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G111903 No alias multidrug resistance-associated protein 14 0.02 Orthogroups_2024-Update
Glyma.08G194600 No alias multidrug resistance-associated protein 6 0.04 Orthogroups_2024-Update
HORVU3Hr1G085890.2 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
HORVU7Hr1G025000.3 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
LOC_Os01g25386 No alias multidrug resistance-associated protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp5g06790.1 No alias subfamily ABCC transporter 0.02 Orthogroups_2024-Update
Potri.003G182601 No alias multidrug resistance-associated protein 11 0.04 Orthogroups_2024-Update
Potri.014G130500 No alias multidrug resistance-associated protein 4 0.03 Orthogroups_2024-Update
Seita.4G047900.1 No alias subfamily ABCC transporter 0.04 Orthogroups_2024-Update
Seita.7G076800.1 No alias subfamily ABCC transporter 0.05 Orthogroups_2024-Update
Seita.7G216700.1 No alias subfamily ABCC transporter 0.03 Orthogroups_2024-Update
Solyc09g075020 No alias Multidrug resistance protein ABC transporter family... 0.04 Orthogroups_2024-Update
evm.model.tig00000718.1 No alias (at2g34660 : 358.0) encodes a multidrug... 0.01 Orthogroups_2024-Update
evm.model.tig00001254.7 No alias (at2g47800 : 162.0) Encodes a plasma membrane localized... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 619 746
IPR011527 ABC1_TM_dom 913 1161
IPR011527 ABC1_TM_dom 364 561
IPR003439 ABC_transporter-like 1242 1390
No external refs found!